Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp5Q9D7S9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm19931-201ENSMUST00000198920 368 ntBASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm5161-201ENSMUST00000075243 853 ntBASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp5Q9D7S9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Gm22175-201ENSMUST00000175007 78 ntBASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp5Q9D7S9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.46■□□□□ 0.22
Chmp5Q9D7S9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp5Q9D7S9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp5Q9D7S9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Chmp5Q9D7S9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Gm17837-201ENSMUST00000186435 985 ntBASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 Gm7775-201ENSMUST00000218871 853 ntBASIC16.45■□□□□ 0.22
Chmp5Q9D7S9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms