Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Gm15678-201ENSMUST00000117573 960 ntBASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Gm9103-201ENSMUST00000119371 405 ntBASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Mir8098-201ENSMUST00000184011 137 ntBASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3a3Q9D554 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Mir698-201ENSMUST00000102164 109 ntBASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Gm44719-201ENSMUST00000206404 149 ntBASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sf3a3Q9D554 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Gm12350-201ENSMUST00000121208 462 ntBASIC13.29□□□□□ -0.28
Sf3a3Q9D554 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms