Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Gm13616-201ENSMUST00000120600 222 ntBASIC13.28□□□□□ -0.28
Cdk9Q99J95 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.28□□□□□ -0.28
Cdk9Q99J95 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Gm9824-201ENSMUST00000178707 561 ntBASIC13.28□□□□□ -0.28
Cdk9Q99J95 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.28□□□□□ -0.28
Cdk9Q99J95 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdk9Q99J95 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.28□□□□□ -0.28
Cdk9Q99J95 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdk9Q99J95 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdk9Q99J95 Mir874-201ENSMUST00000104769 76 ntBASIC13.27□□□□□ -0.29
Cdk9Q99J95 Mir449b-201ENSMUST00000104833 80 ntBASIC13.27□□□□□ -0.29
Cdk9Q99J95 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Gm24158-201ENSMUST00000175263 71 ntBASIC13.27□□□□□ -0.29
Cdk9Q99J95 Gm10253-201ENSMUST00000194270 940 ntBASIC13.27□□□□□ -0.29
Cdk9Q99J95 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Gm7774-201ENSMUST00000200064 533 ntBASIC13.27□□□□□ -0.29
Cdk9Q99J95 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.27□□□□□ -0.29
Cdk9Q99J95 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.27□□□□□ -0.29
Cdk9Q99J95 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk9Q99J95 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.26□□□□□ -0.29
Cdk9Q99J95 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk9Q99J95 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdk9Q99J95 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.26□□□□□ -0.29
Cdk9Q99J95 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms