Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Gm6152-201ENSMUST00000151704 340 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Gm27486-201ENSMUST00000184923 80 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Gm18187-201ENSMUST00000196476 984 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Gm38671-201ENSMUST00000200573 130 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Itm2b-204ENSMUST00000228637 783 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdha3Q91Y16 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm29608-201ENSMUST00000190444 463 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm5035-201ENSMUST00000215581 927 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdha3Q91Y16 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha3Q91Y16 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha3Q91Y16 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdha3Q91Y16 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Pcdha3Q91Y16 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.77□□□□□ -0.2
Pcdha3Q91Y16 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Gm5687-201ENSMUST00000118252 640 ntBASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Gm13612-201ENSMUST00000119276 390 ntBASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.77□□□□□ -0.21
Pcdha3Q91Y16 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms