Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gm8515-201ENSMUST00000194852 576 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gm8463-201ENSMUST00000208573 613 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Gm12091-201ENSMUST00000146791 830 ntBASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Gm6180-201ENSMUST00000065243 498 ntBASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb1Q91Y08 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Gm16202-201ENSMUST00000117532 544 ntBASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Gm44069-201ENSMUST00000204898 506 ntBASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Gm16372-201ENSMUST00000073088 450 ntBASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb1Q91Y08 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdhb1Q91Y08 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms