Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb20Q91XZ9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm43771-201ENSMUST00000202931 1578 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm12485-201ENSMUST00000119641 291 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm18356-201ENSMUST00000185677 623 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm44559-201ENSMUST00000207177 1012 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm18597-201ENSMUST00000209519 694 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm7653-201ENSMUST00000214567 508 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 AC120394.1-201ENSMUST00000217153 351 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 AC164597.1-201ENSMUST00000226538 514 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 AC125464.1-201ENSMUST00000228013 512 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Gm3563-201ENSMUST00000172963 1628 ntBASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb20Q91XZ9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb20Q91XZ9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms