Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Gm16202-201ENSMUST00000117532 544 ntBASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Gm8598-201ENSMUST00000221184 836 ntBASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb6Q91XZ4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb6Q91XZ4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Gm6745-201ENSMUST00000199216 526 ntBASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb6Q91XZ4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Gm11918-201ENSMUST00000121660 179 ntBASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Gm16372-201ENSMUST00000073088 450 ntBASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb6Q91XZ4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms