Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Gm12928-201ENSMUST00000117115 573 ntBASIC13□□□□□ -0.33
Pcdhga4Q91XY4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 AC110817.1-201ENSMUST00000225706 605 ntBASIC13□□□□□ -0.33
Pcdhga4Q91XY4 AC132467.2-202ENSMUST00000227726 559 ntBASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga4Q91XY4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm6244-201ENSMUST00000178732 841 ntBASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm27486-201ENSMUST00000184923 80 ntBASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm2495-201ENSMUST00000191160 466 ntBASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm8463-201ENSMUST00000208573 613 ntBASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga4Q91XY4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhga4Q91XY4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms