Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Trex1Q91XB0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trex1Q91XB0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trex1Q91XB0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trex1Q91XB0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.02■□□□□ -0
Trex1Q91XB0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.02■□□□□ -0
Trex1Q91XB0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trex1Q91XB0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trex1Q91XB0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.02■□□□□ -0
Trex1Q91XB0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.02■□□□□ -0
Trex1Q91XB0 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trex1Q91XB0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.02■□□□□ -0
Trex1Q91XB0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.02■□□□□ -0
Trex1Q91XB0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.02■□□□□ -0
Trex1Q91XB0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.02■□□□□ -0
Trex1Q91XB0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Gm30285-201ENSMUST00000214614 422 ntBASIC15.02■□□□□ -0
Trex1Q91XB0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trex1Q91XB0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trex1Q91XB0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trex1Q91XB0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trex1Q91XB0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trex1Q91XB0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.02□□□□□ -0.01
Trex1Q91XB0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trex1Q91XB0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.01□□□□□ -0.01
Trex1Q91XB0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.01□□□□□ -0.01
Trex1Q91XB0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trex1Q91XB0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15□□□□□ -0.01
Trex1Q91XB0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trex1Q91XB0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
Trex1Q91XB0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trex1Q91XB0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms