Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nkd2Q8VE28 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm12957-201ENSMUST00000117835 377 ntBASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm13226-201ENSMUST00000117838 404 ntBASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkd2Q8VE28 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm15371-201ENSMUST00000117057 784 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm13385-201ENSMUST00000121089 220 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm43094-201ENSMUST00000196549 921 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Nkd2Q8VE28 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Nkd2Q8VE28 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms