Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Prpf39Q8K2Z2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Gm7653-201ENSMUST00000214567 508 ntBASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Gm8598-201ENSMUST00000221184 836 ntBASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Prpf39Q8K2Z2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Gm11978-201ENSMUST00000122315 466 ntBASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Gm27892-201ENSMUST00000185017 106 ntBASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Gm7063-201ENSMUST00000186840 981 ntBASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prpf39Q8K2Z2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.65□□□□□ -0.22
Prpf39Q8K2Z2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms