Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm7029-201ENSMUST00000173226 450 ntBASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm2991-201ENSMUST00000173338 480 ntBASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm38144-201ENSMUST00000192790 465 ntBASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Mir433-201ENSMUST00000093564 124 ntBASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm11618-201ENSMUST00000117946 267 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Mir5132-201ENSMUST00000175166 71 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm6222-202ENSMUST00000182143 629 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm16372-201ENSMUST00000073088 450 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc17Q8CE13 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Gm8805-201ENSMUST00000117848 313 ntBASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc17Q8CE13 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms