Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Gm7488-201ENSMUST00000117148 684 ntBASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Gm6218-201ENSMUST00000219812 628 ntBASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Ccdc87Q8CDL9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc87Q8CDL9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc87Q8CDL9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms