Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trub1Q8C0D0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trub1Q8C0D0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trub1Q8C0D0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trub1Q8C0D0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trub1Q8C0D0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trub1Q8C0D0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trub1Q8C0D0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trub1Q8C0D0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Gm44069-201ENSMUST00000204898 506 ntBASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Gm45384-201ENSMUST00000210451 277 ntBASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Gm9908-201ENSMUST00000211534 448 ntBASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.58□□□□□ -0.24
Trub1Q8C0D0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trub1Q8C0D0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trub1Q8C0D0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trub1Q8C0D0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms