Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Gm15515-201ENSMUST00000117827 822 ntBASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Gm28693-202ENSMUST00000190758 331 ntBASIC10.24□□□□□ -0.77
Chd9Q8BYH8 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Chd9Q8BYH8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gm22121-201ENSMUST00000175148 54 ntBASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gm11451-201ENSMUST00000118946 630 ntBASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gm11978-201ENSMUST00000122315 466 ntBASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gm1821-202ENSMUST00000227415 750 ntBASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Chd9Q8BYH8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Gm7211-201ENSMUST00000172692 1118 ntBASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Gm25998-201ENSMUST00000175397 53 ntBASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Gm23255-201ENSMUST00000102244 110 ntBASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Gm23949-201ENSMUST00000104027 127 ntBASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Gm9507-202ENSMUST00000180157 654 ntBASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Chd9Q8BYH8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms