Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp40Q8BWR4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Gm30285-201ENSMUST00000214614 422 ntBASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.96■□□□□ 0.47
Usp40Q8BWR4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Usp40Q8BWR4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp40Q8BWR4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Daam2-202ENSMUST00000224595 1926 ntBASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm14726-201ENSMUST00000120623 896 ntBASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm25668-201ENSMUST00000157700 129 ntBASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm29199-201ENSMUST00000187766 775 ntBASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp40Q8BWR4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms