Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 AY702102-202ENSMUST00000194651 1173 ntBASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lrrtm4Q80XG9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Gm1335-201ENSMUST00000121653 386 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Gm2231-201ENSMUST00000125661 612 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Snora78-201ENSMUST00000158630 128 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lrrtm4Q80XG9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lrrtm4Q80XG9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms