Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm25261-201ENSMUST00000157416 134 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm37444-201ENSMUST00000193605 439 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.21□□□□□ -0.46
Pif1Q80SX8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pif1Q80SX8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gm14350-201ENSMUST00000116642 640 ntBASIC12.2□□□□□ -0.46
Pif1Q80SX8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gm11793-201ENSMUST00000120433 981 ntBASIC12.2□□□□□ -0.46
Pif1Q80SX8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gm7029-201ENSMUST00000173226 450 ntBASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gm38241-201ENSMUST00000192641 898 ntBASIC12.2□□□□□ -0.46
Pif1Q80SX8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.2□□□□□ -0.46
Pif1Q80SX8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gm9368-201ENSMUST00000219348 831 ntBASIC12.2□□□□□ -0.46
Pif1Q80SX8 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.2□□□□□ -0.46
Pif1Q80SX8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pif1Q80SX8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pif1Q80SX8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pif1Q80SX8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms