Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Sp140Q6NSQ5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Mir6392-201ENSMUST00000184924 108 ntBASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sp140Q6NSQ5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Gm6983-201ENSMUST00000214912 628 ntBASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sp140Q6NSQ5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms