Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
AtmQ62388 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AtmQ62388 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.16□□□□□ -0.46
AtmQ62388 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.16□□□□□ -0.46
AtmQ62388 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
AtmQ62388 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
AtmQ62388 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
AtmQ62388 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
AtmQ62388 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.15□□□□□ -0.46
AtmQ62388 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
AtmQ62388 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.15□□□□□ -0.46
AtmQ62388 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.15□□□□□ -0.46
AtmQ62388 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
AtmQ62388 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.15□□□□□ -0.46
AtmQ62388 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.15□□□□□ -0.46
AtmQ62388 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
AtmQ62388 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.15□□□□□ -0.46
AtmQ62388 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.15□□□□□ -0.46
AtmQ62388 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
AtmQ62388 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
AtmQ62388 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
AtmQ62388 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
AtmQ62388 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
AtmQ62388 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.15□□□□□ -0.47
AtmQ62388 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
AtmQ62388 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
AtmQ62388 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
AtmQ62388 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AtmQ62388 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Gm1821-202ENSMUST00000227415 750 ntBASIC12.14□□□□□ -0.47
AtmQ62388 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
AtmQ62388 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
AtmQ62388 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.14□□□□□ -0.47
AtmQ62388 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.14□□□□□ -0.47
AtmQ62388 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.14□□□□□ -0.47
AtmQ62388 Gm28388-201ENSMUST00000186262 437 ntBASIC12.14□□□□□ -0.47
AtmQ62388 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.14□□□□□ -0.47
AtmQ62388 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.14□□□□□ -0.47
AtmQ62388 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Gm28882-201ENSMUST00000185504 314 ntBASIC12.14□□□□□ -0.47
AtmQ62388 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.14□□□□□ -0.47
AtmQ62388 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.14□□□□□ -0.47
AtmQ62388 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.14□□□□□ -0.47
AtmQ62388 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.14□□□□□ -0.47
AtmQ62388 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AtmQ62388 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AtmQ62388 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AtmQ62388 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms