Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sycp1Q62209 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sycp1Q62209 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sycp1Q62209 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sycp1Q62209 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sycp1Q62209 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sycp1Q62209 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sycp1Q62209 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sycp1Q62209 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sycp1Q62209 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Gm15678-201ENSMUST00000117573 960 ntBASIC14.79□□□□□ -0.04
Sycp1Q62209 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Sycp1Q62209 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.79□□□□□ -0.04
Sycp1Q62209 Gm12138-201ENSMUST00000122180 951 ntBASIC14.79□□□□□ -0.04
Sycp1Q62209 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Sycp1Q62209 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sycp1Q62209 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.79□□□□□ -0.04
Sycp1Q62209 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sycp1Q62209 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sycp1Q62209 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Gm9794-201ENSMUST00000202370 423 ntBASIC14.78□□□□□ -0.04
Sycp1Q62209 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.78□□□□□ -0.04
Sycp1Q62209 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sycp1Q62209 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sycp1Q62209 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.77□□□□□ -0.04
Sycp1Q62209 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Sycp1Q62209 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sycp1Q62209 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sycp1Q62209 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Sycp1Q62209 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.77□□□□□ -0.05
Sycp1Q62209 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sycp1Q62209 Gm11918-201ENSMUST00000121660 179 ntBASIC14.77□□□□□ -0.05
Sycp1Q62209 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.77□□□□□ -0.05
Sycp1Q62209 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.77□□□□□ -0.05
Sycp1Q62209 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sycp1Q62209 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sycp1Q62209 Gm38223-201ENSMUST00000194484 695 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 366.6 ms