Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm13226-201ENSMUST00000117838 404 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm11618-201ENSMUST00000117946 267 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm27331-201ENSMUST00000183705 60 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm45784-201ENSMUST00000188360 142 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Gm29705-201ENSMUST00000212598 474 ntBASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfaip3Q60769 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm16202-201ENSMUST00000117532 544 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Mir7085-201ENSMUST00000184353 66 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm37922-201ENSMUST00000195596 455 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm44069-201ENSMUST00000204898 506 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfaip3Q60769 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 AY702102-202ENSMUST00000194651 1173 ntBASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Gm43818-201ENSMUST00000200605 466 ntBASIC12.4□□□□□ -0.42
Tnfaip3Q60769 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfaip3Q60769 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms