Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Foxd4Q60688 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm11622-201ENSMUST00000120525 691 ntBASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm29741-201ENSMUST00000192667 421 ntBASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Foxd4Q60688 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.81□□□□□ -0.2
Foxd4Q60688 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Foxd4Q60688 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxd4Q60688 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Foxd4Q60688 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm13453-201ENSMUST00000118708 357 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm12507-201ENSMUST00000119155 415 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Foxd4Q60688 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Mir8102-201ENSMUST00000184148 139 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm44608-201ENSMUST00000206827 855 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm5178-201ENSMUST00000219380 898 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm22005-201ENSMUST00000082795 141 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.8□□□□□ -0.2
Foxd4Q60688 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.8□□□□□ -0.2
Foxd4Q60688 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxd4Q60688 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Foxd4Q60688 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Foxd4Q60688 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Foxd4Q60688 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Foxd4Q60688 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Foxd4Q60688 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxd4Q60688 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.79□□□□□ -0.2
Foxd4Q60688 Gm33320-201ENSMUST00000192232 530 ntBASIC13.79□□□□□ -0.2
Foxd4Q60688 Gm37466-201ENSMUST00000195692 652 ntBASIC13.79□□□□□ -0.2
Foxd4Q60688 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms