Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm23270-201ENSMUST00000104055 131 ntBASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm24514-201ENSMUST00000174961 285 ntBASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 AC135669.1-202ENSMUST00000216742 540 ntBASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm10710-201ENSMUST00000047876 3971 ntBASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ccdc88aQ5SNZ0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc88aQ5SNZ0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms