Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Gm17150-201ENSMUST00000165577 381 ntBASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Gm29705-201ENSMUST00000212598 474 ntBASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ckap2Q3V1H1 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.08■□□□□ 0
Ckap2Q3V1H1 Gm8805-201ENSMUST00000117848 313 ntBASIC15.08■□□□□ 0
Ckap2Q3V1H1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.08■□□□□ 0
Ckap2Q3V1H1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.08■□□□□ 0
Ckap2Q3V1H1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.08■□□□□ 0
Ckap2Q3V1H1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ckap2Q3V1H1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.07■□□□□ 0
Ckap2Q3V1H1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm13369-201ENSMUST00000119442 987 ntBASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm2231-201ENSMUST00000125661 612 ntBASIC15.07■□□□□ 0
Ckap2Q3V1H1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.07■□□□□ 0
Ckap2Q3V1H1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ckap2Q3V1H1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ckap2Q3V1H1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms