Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkl5Q3UTQ8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Gm16202-201ENSMUST00000117532 544 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Gm14928-201ENSMUST00000120198 477 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cdkl5Q3UTQ8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Gm14350-201ENSMUST00000116642 640 ntBASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Gm11918-201ENSMUST00000121660 179 ntBASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkl5Q3UTQ8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gm6745-201ENSMUST00000199216 526 ntBASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gm44069-201ENSMUST00000204898 506 ntBASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Gm9908-201ENSMUST00000211534 448 ntBASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.24■□□□□ 0.03
Cdkl5Q3UTQ8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms