Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Q3U1D9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Q3U1D9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Q3U1D9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Q3U1D9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Q3U1D9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Q3U1D9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Q3U1D9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.44□□□□□ -0.58
Q3U1D9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Q3U1D9 Gm15198-201ENSMUST00000117283 177 ntBASIC11.44□□□□□ -0.58
Q3U1D9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Q3U1D9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.44□□□□□ -0.58
Q3U1D9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.44□□□□□ -0.58
Q3U1D9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Q3U1D9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Q3U1D9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Q3U1D9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Q3U1D9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.43□□□□□ -0.58
Q3U1D9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Q3U1D9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.43□□□□□ -0.58
Q3U1D9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Q3U1D9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Q3U1D9 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Q3U1D9 Mir6420-201ENSMUST00000185032 102 ntBASIC11.43□□□□□ -0.58
Q3U1D9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.43□□□□□ -0.58
Q3U1D9 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Gm43179-201ENSMUST00000198797 275 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.43□□□□□ -0.58
Q3U1D9 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Gm19309-201ENSMUST00000218295 205 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Q3U1D9 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Q3U1D9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Q3U1D9 Olfr582-201ENSMUST00000098212 960 ntBASIC11.43□□□□□ -0.58
Q3U1D9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Q3U1D9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Q3U1D9 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms