Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm12403-201ENSMUST00000121384 959 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm27989-201ENSMUST00000184721 107 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gm44344-201ENSMUST00000200287 129 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43aQ3TL54 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.97□□□□□ -0.17
Trim43aQ3TL54 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim43aQ3TL54 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.96□□□□□ -0.17
Trim43aQ3TL54 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms