Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm22144-201ENSMUST00000157402 102 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Gm22058-201ENSMUST00000083393 310 ntBASIC11.69□□□□□ -0.54
Chd8Q09XV5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd8Q09XV5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Gm12712-201ENSMUST00000120676 801 ntBASIC11.68□□□□□ -0.54
Chd8Q09XV5 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Gm43520-201ENSMUST00000197996 164 ntBASIC11.68□□□□□ -0.54
Chd8Q09XV5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Gm24248-201ENSMUST00000157321 322 ntBASIC11.68□□□□□ -0.54
Chd8Q09XV5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.68□□□□□ -0.54
Chd8Q09XV5 Gm6905-201ENSMUST00000205729 511 ntBASIC11.68□□□□□ -0.54
Chd8Q09XV5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd8Q09XV5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.67□□□□□ -0.54
Chd8Q09XV5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.67□□□□□ -0.54
Chd8Q09XV5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.67□□□□□ -0.54
Chd8Q09XV5 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd8Q09XV5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd8Q09XV5 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms