Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.18□□□□□ -0.46
MitfQ08874 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MitfQ08874 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.18□□□□□ -0.46
MitfQ08874 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
MitfQ08874 Gm24158-201ENSMUST00000175263 71 ntBASIC12.18□□□□□ -0.46
MitfQ08874 Mir7221-201ENSMUST00000184009 72 ntBASIC12.18□□□□□ -0.46
MitfQ08874 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.18□□□□□ -0.46
MitfQ08874 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
MitfQ08874 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MitfQ08874 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
MitfQ08874 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.18□□□□□ -0.46
MitfQ08874 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
MitfQ08874 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MitfQ08874 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
MitfQ08874 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
MitfQ08874 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MitfQ08874 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MitfQ08874 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MitfQ08874 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
MitfQ08874 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
MitfQ08874 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.17□□□□□ -0.46
MitfQ08874 Gm15770-201ENSMUST00000117498 584 ntBASIC12.17□□□□□ -0.46
MitfQ08874 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.17□□□□□ -0.46
MitfQ08874 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.17□□□□□ -0.46
MitfQ08874 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
MitfQ08874 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
MitfQ08874 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.17□□□□□ -0.46
MitfQ08874 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
MitfQ08874 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MitfQ08874 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.17□□□□□ -0.46
MitfQ08874 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
MitfQ08874 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.16□□□□□ -0.46
MitfQ08874 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MitfQ08874 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
MitfQ08874 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
MitfQ08874 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.16□□□□□ -0.46
MitfQ08874 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MitfQ08874 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
MitfQ08874 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms