Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.97□□□□□ -0.65
Tff1Q08423 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.97□□□□□ -0.65
Tff1Q08423 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.97□□□□□ -0.65
Tff1Q08423 Gm11918-201ENSMUST00000121660 179 ntBASIC10.97□□□□□ -0.65
Tff1Q08423 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Tff1Q08423 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.97□□□□□ -0.65
Tff1Q08423 Gm45668-201ENSMUST00000211271 493 ntBASIC10.97□□□□□ -0.65
Tff1Q08423 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tff1Q08423 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Tff1Q08423 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Tff1Q08423 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.97□□□□□ -0.65
Tff1Q08423 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.97□□□□□ -0.65
Tff1Q08423 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Tff1Q08423 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Tff1Q08423 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.96□□□□□ -0.65
Tff1Q08423 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.96□□□□□ -0.65
Tff1Q08423 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.96□□□□□ -0.65
Tff1Q08423 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.96□□□□□ -0.65
Tff1Q08423 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm9522-201ENSMUST00000182394 926 ntBASIC10.96□□□□□ -0.65
Tff1Q08423 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.96□□□□□ -0.65
Tff1Q08423 Gm43703-201ENSMUST00000200523 763 ntBASIC10.96□□□□□ -0.65
Tff1Q08423 Gm6266-201ENSMUST00000203844 806 ntBASIC10.96□□□□□ -0.65
Tff1Q08423 Gm6007-201ENSMUST00000208170 823 ntBASIC10.96□□□□□ -0.65
Tff1Q08423 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.96□□□□□ -0.65
Tff1Q08423 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tff1Q08423 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.66
Tff1Q08423 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tff1Q08423 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tff1Q08423 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tff1Q08423 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.96□□□□□ -0.66
Tff1Q08423 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tff1Q08423 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tff1Q08423 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tff1Q08423 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.96□□□□□ -0.66
Tff1Q08423 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.96□□□□□ -0.66
Tff1Q08423 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.95□□□□□ -0.66
Tff1Q08423 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tff1Q08423 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tff1Q08423 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Tff1Q08423 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm22189-201ENSMUST00000103822 86 ntBASIC10.95□□□□□ -0.66
Tff1Q08423 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm15770-201ENSMUST00000117498 584 ntBASIC10.95□□□□□ -0.66
Tff1Q08423 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.95□□□□□ -0.66
Tff1Q08423 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.95□□□□□ -0.66
Tff1Q08423 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Tff1Q08423 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tff1Q08423 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms