Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
GabpaQ00422 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
GabpaQ00422 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
GabpaQ00422 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Gm4986-201ENSMUST00000119731 549 ntBASIC14.91□□□□□ -0.02
GabpaQ00422 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.91□□□□□ -0.02
GabpaQ00422 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
GabpaQ00422 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.91□□□□□ -0.02
GabpaQ00422 Gm2991-201ENSMUST00000173338 480 ntBASIC14.91□□□□□ -0.02
GabpaQ00422 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.91□□□□□ -0.02
GabpaQ00422 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.91□□□□□ -0.02
GabpaQ00422 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.91□□□□□ -0.02
GabpaQ00422 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GabpaQ00422 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.9□□□□□ -0.02
GabpaQ00422 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.9□□□□□ -0.02
GabpaQ00422 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
GabpaQ00422 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.9□□□□□ -0.02
GabpaQ00422 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
GabpaQ00422 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.9□□□□□ -0.02
GabpaQ00422 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.9□□□□□ -0.02
GabpaQ00422 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.9□□□□□ -0.02
GabpaQ00422 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Gm24255-201ENSMUST00000104481 128 ntBASIC14.9□□□□□ -0.02
GabpaQ00422 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Gm4857-201ENSMUST00000192718 785 ntBASIC14.9□□□□□ -0.02
GabpaQ00422 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.9□□□□□ -0.02
GabpaQ00422 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.9□□□□□ -0.02
GabpaQ00422 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.9□□□□□ -0.02
GabpaQ00422 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GabpaQ00422 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.9□□□□□ -0.02
GabpaQ00422 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
GabpaQ00422 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.9□□□□□ -0.02
GabpaQ00422 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.9□□□□□ -0.02
GabpaQ00422 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.9□□□□□ -0.02
GabpaQ00422 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GabpaQ00422 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.89□□□□□ -0.03
GabpaQ00422 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.89□□□□□ -0.03
GabpaQ00422 Gm13316-201ENSMUST00000140537 691 ntBASIC14.89□□□□□ -0.03
GabpaQ00422 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Gm8738-201ENSMUST00000172606 329 ntBASIC14.89□□□□□ -0.03
GabpaQ00422 Gm27243-201ENSMUST00000183964 521 ntBASIC14.89□□□□□ -0.03
GabpaQ00422 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.89□□□□□ -0.03
GabpaQ00422 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Gm21769-201ENSMUST00000211922 111 ntBASIC14.89□□□□□ -0.03
GabpaQ00422 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.89□□□□□ -0.03
GabpaQ00422 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
GabpaQ00422 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
GabpaQ00422 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.89□□□□□ -0.03
GabpaQ00422 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
GabpaQ00422 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GabpaQ00422 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms