Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 AC137842.1-201ENSMUST00000227896 2064 ntBASIC18.28■□□□□ 0.52
Xrn1P97789 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Xrn1P97789 Mir874-201ENSMUST00000104769 76 ntBASIC18.28■□□□□ 0.52
Xrn1P97789 Gm11628-201ENSMUST00000117568 171 ntBASIC18.28■□□□□ 0.52
Xrn1P97789 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC18.28■□□□□ 0.52
Xrn1P97789 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC18.28■□□□□ 0.52
Xrn1P97789 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.28■□□□□ 0.52
Xrn1P97789 Gm19287-201ENSMUST00000203190 358 ntBASIC18.28■□□□□ 0.52
Xrn1P97789 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.28■□□□□ 0.52
Xrn1P97789 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC18.28■□□□□ 0.52
Xrn1P97789 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC18.28■□□□□ 0.52
Xrn1P97789 Gm1821-202ENSMUST00000227415 750 ntBASIC18.28■□□□□ 0.52
Xrn1P97789 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC18.28■□□□□ 0.52
Xrn1P97789 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Xrn1P97789 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Xrn1P97789 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Xrn1P97789 Gm42682-201ENSMUST00000198349 1265 ntBASIC18.27■□□□□ 0.52
Xrn1P97789 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Xrn1P97789 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC18.27■□□□□ 0.51
Xrn1P97789 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Xrn1P97789 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Xrn1P97789 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Xrn1P97789 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Xrn1P97789 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Xrn1P97789 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Xrn1P97789 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Xrn1P97789 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Xrn1P97789 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 Gm18038-201ENSMUST00000197900 485 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Xrn1P97789 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Xrn1P97789 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.26■□□□□ 0.51
Xrn1P97789 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Xrn1P97789 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC18.26■□□□□ 0.51
Xrn1P97789 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Gm11509-201ENSMUST00000117358 325 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC18.26■□□□□ 0.51
Xrn1P97789 Gm8194-201ENSMUST00000159783 859 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC18.26■□□□□ 0.51
Xrn1P97789 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 Gm7600-201ENSMUST00000209657 785 ntBASIC18.26■□□□□ 0.51
Xrn1P97789 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Xrn1P97789 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC18.26■□□□□ 0.51
Xrn1P97789 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Xrn1P97789 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Xrn1P97789 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.25■□□□□ 0.51
Xrn1P97789 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Xrn1P97789 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Xrn1P97789 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Xrn1P97789 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC18.25■□□□□ 0.51
Xrn1P97789 Gm5455-201ENSMUST00000058710 715 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms