Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Map1b-203ENSMUST00000223725 2669 ntBASIC11.04□□□□□ -0.64
SgcaP82350 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.04□□□□□ -0.64
SgcaP82350 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SgcaP82350 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Gm11025-201ENSMUST00000140773 466 ntBASIC11.04□□□□□ -0.64
SgcaP82350 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.04□□□□□ -0.64
SgcaP82350 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.04□□□□□ -0.64
SgcaP82350 Gm27631-201ENSMUST00000184163 466 ntBASIC11.04□□□□□ -0.64
SgcaP82350 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.04□□□□□ -0.64
SgcaP82350 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.04□□□□□ -0.64
SgcaP82350 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.04□□□□□ -0.64
SgcaP82350 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SgcaP82350 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
SgcaP82350 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.04□□□□□ -0.64
SgcaP82350 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SgcaP82350 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.04□□□□□ -0.64
SgcaP82350 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SgcaP82350 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcaP82350 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SgcaP82350 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.03□□□□□ -0.64
SgcaP82350 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.03□□□□□ -0.64
SgcaP82350 Matn2-203ENSMUST00000226766 3252 ntBASIC11.03□□□□□ -0.64
SgcaP82350 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SgcaP82350 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.03□□□□□ -0.64
SgcaP82350 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.03□□□□□ -0.64
SgcaP82350 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.03□□□□□ -0.64
SgcaP82350 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.03□□□□□ -0.64
SgcaP82350 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
SgcaP82350 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SgcaP82350 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.03□□□□□ -0.64
SgcaP82350 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcaP82350 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.03□□□□□ -0.64
SgcaP82350 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SgcaP82350 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcaP82350 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SgcaP82350 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms