Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sf3b6P59708 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sf3b6P59708 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3b6P59708 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sf3b6P59708 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.71□□□□□ -0.54
Sf3b6P59708 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3b6P59708 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Sf3b6P59708 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3b6P59708 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3b6P59708 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3b6P59708 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.71□□□□□ -0.54
Sf3b6P59708 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3b6P59708 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3b6P59708 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3b6P59708 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm24543-201ENSMUST00000103867 82 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm27622-201ENSMUST00000183779 60 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm28196-201ENSMUST00000187719 640 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm10576-201ENSMUST00000191927 825 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm19931-201ENSMUST00000198920 368 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.7□□□□□ -0.54
Sf3b6P59708 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.7□□□□□ -0.54
Sf3b6P59708 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3b6P59708 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm19087-201ENSMUST00000191430 946 ntBASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm44882-201ENSMUST00000205702 802 ntBASIC11.69□□□□□ -0.54
Sf3b6P59708 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.69□□□□□ -0.54
Sf3b6P59708 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.69□□□□□ -0.54
Sf3b6P59708 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sf3b6P59708 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms