Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rrp1P56183 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.87□□□□□ -0.03
Rrp1P56183 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.87□□□□□ -0.03
Rrp1P56183 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rrp1P56183 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.87□□□□□ -0.03
Rrp1P56183 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.87□□□□□ -0.03
Rrp1P56183 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rrp1P56183 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rrp1P56183 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.87□□□□□ -0.03
Rrp1P56183 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.87□□□□□ -0.03
Rrp1P56183 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rrp1P56183 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rrp1P56183 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rrp1P56183 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rrp1P56183 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rrp1P56183 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Gm15376-201ENSMUST00000122258 783 ntBASIC14.86□□□□□ -0.03
Rrp1P56183 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rrp1P56183 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.86□□□□□ -0.03
Rrp1P56183 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.86□□□□□ -0.03
Rrp1P56183 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Gm26464-201ENSMUST00000157094 305 ntBASIC14.86□□□□□ -0.03
Rrp1P56183 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.86□□□□□ -0.03
Rrp1P56183 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.86□□□□□ -0.03
Rrp1P56183 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.86□□□□□ -0.03
Rrp1P56183 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rrp1P56183 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rrp1P56183 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Rrp1P56183 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.85□□□□□ -0.03
Rrp1P56183 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.85□□□□□ -0.03
Rrp1P56183 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.85□□□□□ -0.03
Rrp1P56183 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Rrp1P56183 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm43094-201ENSMUST00000196549 921 ntBASIC14.85□□□□□ -0.03
Rrp1P56183 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.85□□□□□ -0.03
Rrp1P56183 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.85□□□□□ -0.03
Rrp1P56183 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.85□□□□□ -0.03
Rrp1P56183 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rrp1P56183 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.84□□□□□ -0.03
Rrp1P56183 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rrp1P56183 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.84□□□□□ -0.03
Rrp1P56183 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Rrp1P56183 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.84□□□□□ -0.03
Rrp1P56183 Gm9522-201ENSMUST00000182394 926 ntBASIC14.84□□□□□ -0.03
Rrp1P56183 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
Rrp1P56183 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.84□□□□□ -0.03
Rrp1P56183 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rrp1P56183 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms