Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm13888-201ENSMUST00000119148 422 ntBASIC14.5□□□□□ -0.09
Brca1P48754 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.5□□□□□ -0.09
Brca1P48754 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.5□□□□□ -0.09
Brca1P48754 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.5□□□□□ -0.09
Brca1P48754 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.5□□□□□ -0.09
Brca1P48754 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.5□□□□□ -0.09
Brca1P48754 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.5□□□□□ -0.09
Brca1P48754 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Brca1P48754 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.5□□□□□ -0.09
Brca1P48754 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Brca1P48754 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Brca1P48754 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.49□□□□□ -0.09
Brca1P48754 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.49□□□□□ -0.09
Brca1P48754 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Gm15515-201ENSMUST00000117827 822 ntBASIC14.49□□□□□ -0.09
Brca1P48754 Gm12029-201ENSMUST00000120073 832 ntBASIC14.49□□□□□ -0.09
Brca1P48754 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.49□□□□□ -0.09
Brca1P48754 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Gm7666-201ENSMUST00000146631 819 ntBASIC14.49□□□□□ -0.09
Brca1P48754 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.49□□□□□ -0.09
Brca1P48754 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.49□□□□□ -0.09
Brca1P48754 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.49□□□□□ -0.09
Brca1P48754 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.49□□□□□ -0.09
Brca1P48754 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.49□□□□□ -0.09
Brca1P48754 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Brca1P48754 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brca1P48754 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Brca1P48754 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.48□□□□□ -0.09
Brca1P48754 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.48□□□□□ -0.09
Brca1P48754 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.48□□□□□ -0.09
Brca1P48754 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.48□□□□□ -0.09
Brca1P48754 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Brca1P48754 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Brca1P48754 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.48□□□□□ -0.09
Brca1P48754 Gm11675-201ENSMUST00000121873 832 ntBASIC14.48□□□□□ -0.09
Brca1P48754 Rmrp-201ENSMUST00000157463 271 ntBASIC14.48□□□□□ -0.09
Brca1P48754 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.48□□□□□ -0.09
Brca1P48754 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.48□□□□□ -0.09
Brca1P48754 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.48□□□□□ -0.09
Brca1P48754 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brca1P48754 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Brca1P48754 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.47□□□□□ -0.09
Brca1P48754 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms