Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm4909-201ENSMUST00000118749 794 ntBASIC12.47□□□□□ -0.41
Cdx2P43241 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm22902-201ENSMUST00000158488 302 ntBASIC12.47□□□□□ -0.41
Cdx2P43241 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.47□□□□□ -0.41
Cdx2P43241 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdx2P43241 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdx2P43241 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdx2P43241 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdx2P43241 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdx2P43241 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Cdx2P43241 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdx2P43241 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdx2P43241 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Gm14028-201ENSMUST00000117434 479 ntBASIC12.46□□□□□ -0.41
Cdx2P43241 Gm14704-201ENSMUST00000120300 874 ntBASIC12.46□□□□□ -0.41
Cdx2P43241 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdx2P43241 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.46□□□□□ -0.41
Cdx2P43241 Gm13570-201ENSMUST00000140763 309 ntBASIC12.46□□□□□ -0.41
Cdx2P43241 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdx2P43241 Mir5120-201ENSMUST00000175020 78 ntBASIC12.46□□□□□ -0.41
Cdx2P43241 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.46□□□□□ -0.41
Cdx2P43241 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 AA914427-201ENSMUST00000193194 1166 ntBASIC12.46□□□□□ -0.41
Cdx2P43241 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.46□□□□□ -0.41
Cdx2P43241 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.46□□□□□ -0.41
Cdx2P43241 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Cdx2P43241 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdx2P43241 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.46□□□□□ -0.42
Cdx2P43241 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Cdx2P43241 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cdx2P43241 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx2P43241 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Cdx2P43241 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cdx2P43241 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.45□□□□□ -0.42
Cdx2P43241 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Cdx2P43241 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.45□□□□□ -0.42
Cdx2P43241 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Cdx2P43241 Gm11930-201ENSMUST00000117788 190 ntBASIC12.45□□□□□ -0.42
Cdx2P43241 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cdx2P43241 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms