Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Slc6a11P31650 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.54□□□□□ -0.4
Slc6a11P31650 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Slc6a11P31650 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Slc6a11P31650 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.54□□□□□ -0.4
Slc6a11P31650 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a11P31650 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.53□□□□□ -0.4
Slc6a11P31650 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.53□□□□□ -0.4
Slc6a11P31650 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a11P31650 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slc6a11P31650 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.53□□□□□ -0.4
Slc6a11P31650 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.52□□□□□ -0.4
Slc6a11P31650 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a11P31650 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Slc6a11P31650 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a11P31650 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a11P31650 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.52□□□□□ -0.4
Slc6a11P31650 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Slc6a11P31650 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Slc6a11P31650 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a11P31650 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a11P31650 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Slc6a11P31650 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a11P31650 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a11P31650 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Slc6a11P31650 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.52□□□□□ -0.41
Slc6a11P31650 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Slc6a11P31650 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Slc6a11P31650 Gm11425-201ENSMUST00000119608 498 ntBASIC12.52□□□□□ -0.41
Slc6a11P31650 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.52□□□□□ -0.41
Slc6a11P31650 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.52□□□□□ -0.41
Slc6a11P31650 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Gm21854-201ENSMUST00000179901 471 ntBASIC12.52□□□□□ -0.41
Slc6a11P31650 Gm45841-201ENSMUST00000207700 164 ntBASIC12.52□□□□□ -0.41
Slc6a11P31650 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Slc6a11P31650 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Gm9396-201ENSMUST00000076703 567 ntBASIC12.52□□□□□ -0.41
Slc6a11P31650 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a11P31650 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.52□□□□□ -0.41
Slc6a11P31650 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a11P31650 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms