Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Gm42693-201ENSMUST00000196779 631 ntBASIC12.79□□□□□ -0.36
Hoxc11P31313 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxc11P31313 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxc11P31313 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Gm45331-201ENSMUST00000209868 554 ntBASIC12.79□□□□□ -0.36
Hoxc11P31313 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Gm29705-201ENSMUST00000212598 474 ntBASIC12.79□□□□□ -0.36
Hoxc11P31313 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.79□□□□□ -0.36
Hoxc11P31313 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc11P31313 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc11P31313 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm16177-201ENSMUST00000120728 718 ntBASIC12.78□□□□□ -0.36
Hoxc11P31313 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxc11P31313 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm27514-201ENSMUST00000183692 110 ntBASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm5370-201ENSMUST00000187187 574 ntBASIC12.78□□□□□ -0.36
Hoxc11P31313 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.78□□□□□ -0.36
Hoxc11P31313 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxc11P31313 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxc11P31313 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.77□□□□□ -0.36
Hoxc11P31313 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc11P31313 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc11P31313 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc11P31313 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc11P31313 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc11P31313 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc11P31313 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hoxc11P31313 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc11P31313 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc11P31313 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc11P31313 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm12203-201ENSMUST00000118235 598 ntBASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm12209-201ENSMUST00000120089 596 ntBASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm4271-201ENSMUST00000174444 973 ntBASIC12.77□□□□□ -0.37
Hoxc11P31313 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Hoxc11P31313 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc11P31313 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc11P31313 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.77□□□□□ -0.37
Hoxc11P31313 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms