Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prim1P20664 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prim1P20664 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prim1P20664 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.8■□□□□ 0.28
Prim1P20664 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.8■□□□□ 0.28
Prim1P20664 Gm17208-201ENSMUST00000168388 535 ntBASIC16.8■□□□□ 0.28
Prim1P20664 Gm38313-201ENSMUST00000191953 1266 ntBASIC16.8■□□□□ 0.28
Prim1P20664 Gm4768-201ENSMUST00000206199 686 ntBASIC16.8■□□□□ 0.28
Prim1P20664 Olfr284-202ENSMUST00000206647 966 ntBASIC16.8■□□□□ 0.28
Prim1P20664 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.8■□□□□ 0.28
Prim1P20664 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.8■□□□□ 0.28
Prim1P20664 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC16.8■□□□□ 0.28
Prim1P20664 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.8■□□□□ 0.28
Prim1P20664 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.8■□□□□ 0.28
Prim1P20664 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.8■□□□□ 0.28
Prim1P20664 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Prim1P20664 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prim1P20664 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prim1P20664 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.79■□□□□ 0.28
Prim1P20664 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.79■□□□□ 0.28
Prim1P20664 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Prim1P20664 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC16.79■□□□□ 0.28
Prim1P20664 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.79■□□□□ 0.28
Prim1P20664 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Prim1P20664 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Prim1P20664 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prim1P20664 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.78■□□□□ 0.28
Prim1P20664 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Prim1P20664 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Gm16379-201ENSMUST00000161469 348 ntBASIC16.78■□□□□ 0.28
Prim1P20664 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.78■□□□□ 0.28
Prim1P20664 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.78■□□□□ 0.28
Prim1P20664 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Mir7221-201ENSMUST00000184009 72 ntBASIC16.78■□□□□ 0.28
Prim1P20664 Gm8762-201ENSMUST00000193486 339 ntBASIC16.78■□□□□ 0.28
Prim1P20664 Gm6334-201ENSMUST00000207083 228 ntBASIC16.78■□□□□ 0.28
Prim1P20664 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Prim1P20664 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prim1P20664 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Prim1P20664 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Prim1P20664 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms