Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.76□□□□□ -0.53
P06344 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
P06344 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P06344 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
P06344 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.75□□□□□ -0.53
P06344 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.75□□□□□ -0.53
P06344 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.75□□□□□ -0.53
P06344 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.75□□□□□ -0.53
P06344 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
P06344 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.75□□□□□ -0.53
P06344 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.75□□□□□ -0.53
P06344 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Gm6447-201ENSMUST00000118905 835 ntBASIC11.75□□□□□ -0.53
P06344 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.75□□□□□ -0.53
P06344 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P06344 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Gm27331-201ENSMUST00000183705 60 ntBASIC11.75□□□□□ -0.53
P06344 Gm45784-201ENSMUST00000188360 142 ntBASIC11.75□□□□□ -0.53
P06344 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.75□□□□□ -0.53
P06344 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.75□□□□□ -0.53
P06344 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.75□□□□□ -0.53
P06344 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Gm16372-201ENSMUST00000073088 450 ntBASIC11.75□□□□□ -0.53
P06344 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P06344 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P06344 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.75□□□□□ -0.53
P06344 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.75□□□□□ -0.53
P06344 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.75□□□□□ -0.53
P06344 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06344 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
P06344 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P06344 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
P06344 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P06344 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P06344 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.74□□□□□ -0.53
P06344 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Gm11618-201ENSMUST00000117946 267 ntBASIC11.74□□□□□ -0.53
P06344 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.74□□□□□ -0.53
P06344 Gm29705-201ENSMUST00000212598 474 ntBASIC11.74□□□□□ -0.53
P06344 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.74□□□□□ -0.53
P06344 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.74□□□□□ -0.53
P06344 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06344 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms