Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm28911-201ENSMUST00000188837 117 ntBASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Igh-VJ558P01758 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Igh-VJ558P01758 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.37□□□□□ -0.59
Igh-VJ558P01758 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Igh-VJ558P01758 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms