Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pdlim1O70400 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim1O70400 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim1O70400 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Pdlim1O70400 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim1O70400 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim1O70400 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim1O70400 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim1O70400 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim1O70400 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.02□□□□□ -0.32
Pdlim1O70400 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim1O70400 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm22331-201ENSMUST00000158066 136 ntBASIC13.02□□□□□ -0.33
Pdlim1O70400 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm8602-201ENSMUST00000184045 607 ntBASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm37497-201ENSMUST00000195830 798 ntBASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.02□□□□□ -0.33
Pdlim1O70400 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.02□□□□□ -0.33
Pdlim1O70400 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim1O70400 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim1O70400 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm4984-201ENSMUST00000115987 360 ntBASIC13.01□□□□□ -0.33
Pdlim1O70400 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm18187-201ENSMUST00000196476 984 ntBASIC13.01□□□□□ -0.33
Pdlim1O70400 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.01□□□□□ -0.33
Pdlim1O70400 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm6091-201ENSMUST00000098307 165 ntBASIC13.01□□□□□ -0.33
Pdlim1O70400 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.01□□□□□ -0.33
Pdlim1O70400 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.01□□□□□ -0.33
Pdlim1O70400 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim1O70400 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.01□□□□□ -0.33
Pdlim1O70400 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms