Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
BckdkO55028 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.25□□□□□ -0.45
BckdkO55028 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
BckdkO55028 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.25□□□□□ -0.45
BckdkO55028 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Gm12928-201ENSMUST00000117115 573 ntBASIC12.24□□□□□ -0.45
BckdkO55028 Gm15376-201ENSMUST00000122258 783 ntBASIC12.24□□□□□ -0.45
BckdkO55028 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.24□□□□□ -0.45
BckdkO55028 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.24□□□□□ -0.45
BckdkO55028 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.24□□□□□ -0.45
BckdkO55028 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
BckdkO55028 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Gm2495-201ENSMUST00000191160 466 ntBASIC12.24□□□□□ -0.45
BckdkO55028 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.24□□□□□ -0.45
BckdkO55028 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.24□□□□□ -0.45
BckdkO55028 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.24□□□□□ -0.45
BckdkO55028 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.24□□□□□ -0.45
BckdkO55028 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
BckdkO55028 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BckdkO55028 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BckdkO55028 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BckdkO55028 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
BckdkO55028 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BckdkO55028 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
BckdkO55028 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.23□□□□□ -0.45
BckdkO55028 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.23□□□□□ -0.45
BckdkO55028 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.23□□□□□ -0.45
BckdkO55028 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Gm27839-201ENSMUST00000184242 106 ntBASIC12.23□□□□□ -0.45
BckdkO55028 Gm38223-201ENSMUST00000194484 695 ntBASIC12.23□□□□□ -0.45
BckdkO55028 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.23□□□□□ -0.45
BckdkO55028 Gm6983-201ENSMUST00000214912 628 ntBASIC12.23□□□□□ -0.45
BckdkO55028 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.23□□□□□ -0.45
BckdkO55028 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BckdkO55028 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
BckdkO55028 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
BckdkO55028 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.23□□□□□ -0.45
BckdkO55028 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.23□□□□□ -0.45
BckdkO55028 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BckdkO55028 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.22□□□□□ -0.45
BckdkO55028 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BckdkO55028 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms