Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Mir6990-201ENSMUST00000183724 91 ntBASIC11.72□□□□□ -0.53
Lsm2O35900 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.72□□□□□ -0.53
Lsm2O35900 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Lsm2O35900 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.72□□□□□ -0.53
Lsm2O35900 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lsm2O35900 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Lsm2O35900 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm2O35900 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm2O35900 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lsm2O35900 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Gm22065-201ENSMUST00000103753 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm22066-201ENSMUST00000103761 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24932-201ENSMUST00000103763 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24115-201ENSMUST00000103799 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm22190-201ENSMUST00000103827 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm22191-201ENSMUST00000103831 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24721-201ENSMUST00000103849 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm28018-201ENSMUST00000103869 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm26399-201ENSMUST00000103937 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Lsm2O35900 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Gm25349-201ENSMUST00000177728 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm23616-201ENSMUST00000177797 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm25871-201ENSMUST00000177816 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24752-201ENSMUST00000178240 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24496-201ENSMUST00000178287 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm25649-201ENSMUST00000178476 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm25548-201ENSMUST00000178681 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm23147-201ENSMUST00000178841 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm26095-201ENSMUST00000179270 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm22171-201ENSMUST00000179283 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm23936-201ENSMUST00000179354 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm22619-201ENSMUST00000179516 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm25255-201ENSMUST00000179579 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24755-201ENSMUST00000179691 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm26506-201ENSMUST00000179692 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm25086-201ENSMUST00000179931 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm23243-201ENSMUST00000180047 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24659-201ENSMUST00000180212 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm24169-201ENSMUST00000180244 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm23689-201ENSMUST00000180354 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm27359-201ENSMUST00000184153 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm27785-201ENSMUST00000184268 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm27466-201ENSMUST00000184396 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm27703-201ENSMUST00000184836 110 ntBASIC11.71□□□□□ -0.53
Lsm2O35900 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.71□□□□□ -0.53
Lsm2O35900 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lsm2O35900 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm2O35900 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms