Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Gm22189-201ENSMUST00000103822 86 ntBASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Gm44855-201ENSMUST00000205725 362 ntBASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh9F8VPK8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Mir6977-201ENSMUST00000184960 64 ntBASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gm42612-201ENSMUST00000197986 623 ntBASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gm43170-201ENSMUST00000199827 612 ntBASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh9F8VPK8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm6447-201ENSMUST00000118905 835 ntBASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm42550-201ENSMUST00000201553 960 ntBASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm6218-201ENSMUST00000219812 628 ntBASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Gm26315-201ENSMUST00000083890 321 ntBASIC13.49□□□□□ -0.25
Pcdh9F8VPK8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms