Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.75■□□□□ 0.11
Ube4aE9Q735 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4aE9Q735 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Daam2-202ENSMUST00000224595 1926 ntBASIC15.74■□□□□ 0.11
Ube4aE9Q735 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Gm5950-201ENSMUST00000213337 772 ntBASIC15.74■□□□□ 0.11
Ube4aE9Q735 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.74■□□□□ 0.11
Ube4aE9Q735 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4aE9Q735 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.73■□□□□ 0.11
Ube4aE9Q735 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.73■□□□□ 0.11
Ube4aE9Q735 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.73■□□□□ 0.11
Ube4aE9Q735 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4aE9Q735 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.72■□□□□ 0.11
Ube4aE9Q735 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.72■□□□□ 0.11
Ube4aE9Q735 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.72■□□□□ 0.11
Ube4aE9Q735 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm11531-201ENSMUST00000117614 555 ntBASIC15.72■□□□□ 0.11
Ube4aE9Q735 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm2546-201ENSMUST00000182630 991 ntBASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.72■□□□□ 0.11
Ube4aE9Q735 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms