Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Gm11793-201ENSMUST00000120433 981 ntBASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Mir8109-201ENSMUST00000184375 117 ntBASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Gm18935-201ENSMUST00000212692 664 ntBASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Gm19163-201ENSMUST00000223313 780 ntBASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Srp54bE9PXC0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gm6222-202ENSMUST00000182143 629 ntBASIC12.98□□□□□ -0.33
Srp54bE9PXC0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.98□□□□□ -0.33
Srp54bE9PXC0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.98□□□□□ -0.33
Srp54bE9PXC0 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Srp54bE9PXC0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Gm28693-202ENSMUST00000190758 331 ntBASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Gm4768-201ENSMUST00000206199 686 ntBASIC12.97□□□□□ -0.33
Srp54bE9PXC0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.97□□□□□ -0.33
Srp54bE9PXC0 Gm9257-201ENSMUST00000221254 232 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms