Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Gm15653-201ENSMUST00000119247 907 ntBASIC11.05□□□□□ -0.64
BC048679D3YXE9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Syt7-205ENSMUST00000224135 1557 ntBASIC11.05□□□□□ -0.64
BC048679D3YXE9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.05□□□□□ -0.64
BC048679D3YXE9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BC048679D3YXE9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.04□□□□□ -0.64
BC048679D3YXE9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.04□□□□□ -0.64
BC048679D3YXE9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.04□□□□□ -0.64
BC048679D3YXE9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BC048679D3YXE9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.03□□□□□ -0.64
BC048679D3YXE9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Gm6912-201ENSMUST00000117218 544 ntBASIC11.03□□□□□ -0.64
BC048679D3YXE9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BC048679D3YXE9 Gm2213-201ENSMUST00000197485 688 ntBASIC11.03□□□□□ -0.64
BC048679D3YXE9 Chchd1-203ENSMUST00000224633 557 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms